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Molecular cloning, expression, and characterization of endo-beta-1,4-glucanase genes from Bacillus polymyxa and Bacillus circulans.

机译:来自多粘芽孢杆菌和圆形芽孢杆菌的内切β-1,4-葡聚糖酶基因的分子克隆,表达和表征。

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摘要

Endo-beta-1,4-glucanase genes from Bacillus circulans and from B. polymyxa were cloned by direct expression by using bacteriophage M13mp9 as the vector. The enzymatic activity of the gene products was detected by using either the Congo red assay or hydroxyethyl cellulose dyed with Ostazin Brilliant Red H-3B. The B. circulans and B. subtilis PAP115 endo-beta-1,4-glucanase genes were shown to be homologous by the use of restriction endonuclease site mapping, DNA-DNA hybridization, S1 nuclease digestion after heteroduplex formation, and sodium dodecyl sulfate-polyacrylamide gel electrophoresis of the protein products. Analysis of the nucleotide sequence of 3.1 kilobase pairs of cloned B. polymyxa DNA revealed two convergently transcribed open reading frames (ORFs) consisting of 398 codons (endoglucanase) and 187 codons (ORF2) and separated by 374 nucleotides. The coding region of the B. polymyxa endoglucanase gene would theoretically produce a 44-kilodalton preprotein. Expression of the B. polymyxa endoglucanase in Escherichia coli was due to a fusion of the endoglucanase gene at codon 30 with codon 9 of the lacZ alpha-peptide gene. The B. polymyxa endoglucanase has 34% amino acid similarity to the Clostridium thermocellum celB endoglucanase sequence but very little similarity to endoglucanases from other Bacillus species. ORF2 has 28% amino acid similarity to the NH2-terminal half of the E. coli lac repressor protein, which is responsible for DNA binding.
机译:通过使用噬菌体M13mp9作为载体,通过直接表达克隆了来自圆形芽孢杆菌和多粘芽孢杆菌的内-β-1,4-葡聚糖酶基因。通过使用刚果红测定法或用Ostazin亮红H-3B染色的羟乙基纤维素检测基因产物的酶活性。通过使用限制性核酸内切酶位点作图,DNA-DNA杂交,异源双链形成后的S1核酸酶消化和十二烷基硫酸钠-使用限制性内切酶位点图谱显示,马氏芽孢杆菌和枯草芽孢杆菌PAP115内切β-1,4-葡聚糖酶基因是同源的。聚丙烯酰胺凝胶电泳的蛋白质产物。克隆的多粘芽孢杆菌DNA的3.1千对碱基对的核苷酸序列分析显示,两个聚合转录的开放阅读框(ORF)由398个密码子(内切葡聚糖酶)和187个密码子(ORF2)组成,并被374个核苷酸隔开。理论上,多粘芽孢杆菌内切葡聚糖酶基因的编码区将产生44-千达尔顿的前蛋白。多粘芽孢杆菌内切葡聚糖酶在大肠杆菌中的表达归因于第30密码子的内切葡聚糖酶基因与lacZα-肽基因的第9密码子融合。多粘芽孢杆菌内切葡聚糖酶与热纤梭菌celB内切葡聚糖酶序列具有34%的氨基酸相似性,但与其他芽孢杆菌属物种的内切葡聚糖酶相似性很小。 ORF2与大肠杆菌lac阻遏蛋白的NH2末端一半具有28%的氨基酸相似性,后者负责DNA结合。

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